2017년 11월 9일 목요일

R 3.4.1의 설치 및 기존 rstudio와의 연동

예전에 쓰던 버전의 R (가령 3.3.2)를 그대로 놔둔 상태에서, 새로운 버전의 R 3.4.1을 써야 할 경우가 있습니다.  이때는 아래 절차에 따라 설치하시면 됩니다.

먼저, 아래 link에서 제가 ppc64le(POWER8) 상에서 빌드한 R server 3.4.1을 여기서 download 받아서, 기존 서버의 사용자 홈 디렉토리에 upload 한 뒤 자신의 홈 디렉토리에 풀어놓습니다. 
여기서는 u0017649라는 유저의 홈디렉토리에 풀었습니다만, 아무 곳에 풀어놓아도 상관없습니다.   기존 버전은 /usr/local/lib/R 밑에 설치되어 있을 것입니다.

u0017649@sys-89830:~$ tar -zxf R341.tgz

u0017649@sys-89830:~$ cd R
u0017649@sys-89830:~/R$ pwd
/home/u0017649/R

이제 새로 풀어놓은 R을 Rstudio와 연동시키기 위해서, 다음과 같이 기존 /usr/bin/R을 다음과 같이 옮겨놓고, 방금 풀어놓은 R을 /usr/bin/R로 softlink를 시켜 줍니다.

u0017649@sys-89830:~/R$ sudo mv /usr/bin/R /usr/bin/R.old

u0017649@sys-89830:~/R$ sudo ln /home/u0017649/R/bin/R /usr/bin/R

이제 Rstudio를 재시작합니다.

u0017649@sys-89830:~/R$ sudo systemctl stop rstudio-server.service
u0017649@sys-89830:~/R$ sudo systemctl start rstudio-server.service

u0017649@sys-89830:~/R$ sudo systemctl status rstudio-server.service
● rstudio-server.service - LSB: RStudio Server
   Loaded: loaded (/etc/init.d/rstudio-server; bad; vendor preset: enabled)
   Active: active (running) since Wed 2017-11-08 20:26:40 EST; 7s ago
     Docs: man:systemd-sysv-generator(8)
  Process: 12456 ExecStop=/etc/init.d/rstudio-server stop (code=exited, status=0/SUCCESS)
  Process: 12469 ExecStart=/etc/init.d/rstudio-server start (code=exited, status=0/SUCCESS)
    Tasks: 3
   Memory: 10.1M
      CPU: 661ms
   CGroup: /system.slice/rstudio-server.service
           └─12477 /usr/local/lib/rstudio-server/bin/rserver

Nov 08 20:26:40 sys-89830 systemd[1]: Starting LSB: RStudio Server...
Nov 08 20:26:40 sys-89830 systemd[1]: Started LSB: RStudio Server.

그 다음에 평소대로 http://서버주소:8787 로 접속하시면 됩니다.  아래와 같이 잘 됩니다.



참고1) 기존 Rstudio 버전(Version 99.9.9)은 새 R 3.4.1과 위와 같이 잘 연동됩니다.

참고2) 여기서 사용된 CRAN R 3.4.1의 빌드는 예전 포스팅 http://hwengineer.blogspot.kr/2017/06/ppc64le-ubuntu-cran-r-package-rstudio.html 에 나온 절차대로 하시면 됩니다. 

참고3) 이 R341.tgz 속에 설치된 R 패키지들은 다음과 같습니다.

> installed.packages()
              Package        
anim.plots    "anim.plots"   
animation     "animation"    
assertthat    "assertthat"   
BH            "BH"           
bindr         "bindr"        
bindrcpp      "bindrcpp"     
bitops        "bitops"       
boot          "boot"         
Boruta        "Boruta"       
caret         "caret"        
caretEnsemble "caretEnsemble"
caTools       "caTools"      
class         "class"        
cluster       "cluster"      
codetools     "codetools"    
colorspace    "colorspace"   
curl          "curl"         
CVST          "CVST"         
data.table    "data.table"   
ddalpha       "ddalpha"      
DEoptimR      "DEoptimR"     
dichromat     "dichromat"    
digest        "digest"       
dimRed        "dimRed"       
dplyr         "dplyr"        
DRR           "DRR"          
e1071         "e1071"        
evaluate      "evaluate"     
foreach       "foreach"      
foreign       "foreign"      
gdata         "gdata"        
ggplot2       "ggplot2"      
glue          "glue"         
gower         "gower"        
gplots        "gplots"       
gridExtra     "gridExtra"    
gtable        "gtable"       
gtools        "gtools"       
highr         "highr"        
ipred         "ipred"        
iterators     "iterators"    
kernlab       "kernlab"      
KernSmooth    "KernSmooth"   
knitr         "knitr"        
labeling      "labeling"     
lattice       "lattice"      
lava          "lava"         
lazyeval      "lazyeval"     
lubridate     "lubridate"    
magrittr      "magrittr"     
markdown      "markdown"     
MASS          "MASS"         
Matrix        "Matrix"       
mgcv          "mgcv"         
mime          "mime"         
ModelMetrics  "ModelMetrics" 
munsell       "munsell"      
nlme          "nlme"         
numDeriv      "numDeriv"     
pbapply       "pbapply"      
pkgconfig     "pkgconfig"    
plogr         "plogr"        
              LibPath                        
anim.plots    "/usr/local/lib/R/site-library"
animation     "/usr/local/lib/R/site-library"
assertthat    "/usr/local/lib/R/site-library"
BH            "/usr/local/lib/R/site-library"
bindr         "/usr/local/lib/R/site-library"
bindrcpp      "/usr/local/lib/R/site-library"
bitops        "/usr/local/lib/R/site-library"
boot          "/usr/local/lib/R/site-library"
Boruta        "/usr/local/lib/R/site-library"
caret         "/usr/local/lib/R/site-library"
caretEnsemble "/usr/local/lib/R/site-library"
caTools       "/usr/local/lib/R/site-library"
class         "/usr/local/lib/R/site-library"
cluster       "/usr/local/lib/R/site-library"
codetools     "/usr/local/lib/R/site-library"
colorspace    "/usr/local/lib/R/site-library"
curl          "/usr/local/lib/R/site-library"
CVST          "/usr/local/lib/R/site-library"
data.table    "/usr/local/lib/R/site-library"
ddalpha       "/usr/local/lib/R/site-library"
DEoptimR      "/usr/local/lib/R/site-library"
dichromat     "/usr/local/lib/R/site-library"
digest        "/usr/local/lib/R/site-library"
dimRed        "/usr/local/lib/R/site-library"
dplyr         "/usr/local/lib/R/site-library"
DRR           "/usr/local/lib/R/site-library"
e1071         "/usr/local/lib/R/site-library"
evaluate      "/usr/local/lib/R/site-library"
foreach       "/usr/local/lib/R/site-library"
foreign       "/usr/local/lib/R/site-library"
gdata         "/usr/local/lib/R/site-library"
ggplot2       "/usr/local/lib/R/site-library"
glue          "/usr/local/lib/R/site-library"
gower         "/usr/local/lib/R/site-library"
gplots        "/usr/local/lib/R/site-library"
gridExtra     "/usr/local/lib/R/site-library"
gtable        "/usr/local/lib/R/site-library"
gtools        "/usr/local/lib/R/site-library"
highr         "/usr/local/lib/R/site-library"
ipred         "/usr/local/lib/R/site-library"
iterators     "/usr/local/lib/R/site-library"
kernlab       "/usr/local/lib/R/site-library"
KernSmooth    "/usr/local/lib/R/site-library"
knitr         "/usr/local/lib/R/site-library"
labeling      "/usr/local/lib/R/site-library"
lattice       "/usr/local/lib/R/site-library"
lava          "/usr/local/lib/R/site-library"
lazyeval      "/usr/local/lib/R/site-library"
lubridate     "/usr/local/lib/R/site-library"
magrittr      "/usr/local/lib/R/site-library"
markdown      "/usr/local/lib/R/site-library"
MASS          "/usr/local/lib/R/site-library"
Matrix        "/usr/local/lib/R/site-library"
mgcv          "/usr/local/lib/R/site-library"
mime          "/usr/local/lib/R/site-library"
ModelMetrics  "/usr/local/lib/R/site-library"
munsell       "/usr/local/lib/R/site-library"
nlme          "/usr/local/lib/R/site-library"
numDeriv      "/usr/local/lib/R/site-library"
pbapply       "/usr/local/lib/R/site-library"
pkgconfig     "/usr/local/lib/R/site-library"
plogr         "/usr/local/lib/R/site-library"
              Version     Priority     
anim.plots    "0.2"       NA           
animation     "2.5"       NA           
assertthat    "0.2.0"     NA           
BH            "1.65.0-1"  NA           
bindr         "0.1"       NA           
bindrcpp      "0.2"       NA           
bitops        "1.0-6"     NA           
boot          "1.3-20"    "recommended"
Boruta        "5.2.0"     NA           
caret         "6.0-77"    NA           
caretEnsemble "2.0.0"     NA           
caTools       "1.17.1"    NA           
class         "7.3-14"    "recommended"
cluster       "2.0.6"     "recommended"
codetools     "0.2-15"    "recommended"
colorspace    "1.3-2"     NA           
curl          "3.0"       NA           
CVST          "0.2-1"     NA           
data.table    "1.10.4-3"  NA           
ddalpha       "1.3.1"     NA           
DEoptimR      "1.0-8"     NA           
dichromat     "2.0-0"     NA           
digest        "0.6.12"    NA           
dimRed        "0.1.0"     NA           
dplyr         "0.7.4"     NA           
DRR           "0.0.2"     NA           
e1071         "1.6-8"     NA           
evaluate      "0.10.1"    NA           
foreach       "1.4.3"     NA           
foreign       "0.8-69"    "recommended"
gdata         "2.18.0"    NA           
ggplot2       "2.2.1"     NA           
glue          "1.2.0"     NA           
gower         "0.1.2"     NA           
gplots        "3.0.1"     NA           
gridExtra     "2.3"       NA           
gtable        "0.2.0"     NA           
gtools        "3.5.0"     NA           
highr         "0.6"       NA           
ipred         "0.9-6"     NA           
iterators     "1.0.8"     NA           
kernlab       "0.9-25"    NA           
KernSmooth    "2.23-15"   "recommended"
knitr         "1.17"      NA           
labeling      "0.3"       NA           
lattice       "0.20-35"   "recommended"
lava          "1.5.1"     NA           
lazyeval      "0.2.1"     NA           
lubridate     "1.7.1"     NA           
magrittr      "1.5"       NA           
markdown      "0.8"       NA           
MASS          "7.3-47"    "recommended"
Matrix        "1.2-11"    "recommended"
mgcv          "1.8-22"    "recommended"
mime          "0.5"       NA           
ModelMetrics  "1.1.0"     NA           
munsell       "0.4.3"     NA           
nlme          "3.1-131"   "recommended"
numDeriv      "2016.8-1"  NA           
pbapply       "1.3-3"     NA           
pkgconfig     "2.0.1"     NA           
plogr         "0.1-1"     NA           
              Depends                                                               
anim.plots    NA                                                                    
animation     "R (>= 2.14.0)"                                                       
assertthat    NA                                                                    
BH            NA                                                                    
bindr         NA                                                                    
bindrcpp      NA                                                                    
bitops        NA                                                                    
boot          "R (>= 3.0.0), graphics, stats"                                       
Boruta        "ranger"                                                              
caret         "R (>= 2.10), lattice (>= 0.20), ggplot2"                             
caretEnsemble "R (>= 3.2.0)"                                                        
caTools       "R (>= 2.2.0)"                                                        
class         "R (>= 3.0.0), stats, utils"                                          
cluster       "R (>= 3.0.1)"                                                        
codetools     "R (>= 2.1)"                                                          
colorspace    "R (>= 2.13.0), methods"                                              
curl          "R (>= 3.0.0)"                                                        
CVST          "kernlab,Matrix"                                                      
data.table    "R (>= 3.0.0)"                                                        
ddalpha       "stats, utils, graphics, grDevices, MASS, class, robustbase,\nsfsmisc"
DEoptimR      NA                                                                    
dichromat     "R (>= 2.10), stats"                                                  
digest        "R (>= 2.4.1)"                                                        
dimRed        "R (>= 3.0.0), methods, DRR"                                          
dplyr         "R (>= 3.1.2)"                                                        
DRR           "kernlab, CVST, Matrix"                                               
e1071         NA                                                                    
evaluate      "R (>= 3.0.2)"                                                        
foreach       "R (>= 2.5.0)"                                                        
foreign       "R (>= 3.0.0)"                                                        
gdata         "R (>= 2.3.0)"                                                        
ggplot2       "R (>= 3.1)"                                                          
glue          "R (>= 3.1)"                                                          
gower         NA                                                                    
gplots        "R (>= 3.0)"                                                          
gridExtra     NA                                                                    
gtable        "R (>= 2.14)"                                                         
gtools        "R (>= 2.10)"                                                         
highr         "R (>= 3.0.2)"                                                        
ipred         "R (>= 2.10)"                                                         
iterators     "R (>= 2.5.0), utils"                                                 
kernlab       "R (>= 2.10)"                                                         
KernSmooth    "R (>= 2.5.0), stats"                                                 
knitr         "R (>= 3.1.0)"                                                        
labeling      NA                                                                    
lattice       "R (>= 3.0.0)"                                                        
lava          "R (>= 3.0)"                                                          
lazyeval      "R (>= 3.1.0)"                                                        
lubridate     "methods, R (>= 3.0.0)"                                               
magrittr      NA                                                                    
markdown      "R (>= 2.11.1)"                                                       
MASS          "R (>= 3.1.0), grDevices, graphics, stats, utils"                     
Matrix        "R (>= 3.0.1)"                                                        
mgcv          "R (>= 2.14.0), nlme (>= 3.1-64)"                                     
mime          NA                                                                    
ModelMetrics  "R (>= 3.2.2)"                                                        
munsell       NA                                                                    
nlme          "R (>= 3.0.2)"                                                        
numDeriv      "R (>= 2.11.1)"                                                       
pbapply       "R (>= 3.2.0)"                                                        
pkgconfig     NA                                                                    
plogr         NA                                                                    
              Imports                                                                                                                                             
anim.plots    "animation"                                                                                                                                         
animation     NA                                                                                                                                                  
assertthat    "tools"                                                                                                                                             
BH            NA                                                                                                                                                  
bindr         NA                                                                                                                                                  
bindrcpp      "Rcpp, bindr"                                                                                                                                       
bitops        NA                                                                                                                                                  
boot          NA                                                                                                                                                  
Boruta        NA                                                                                                                                                  
caret         "foreach, methods, plyr, ModelMetrics (>= 1.1.0), nlme,\nreshape2, stats, stats4, utils, grDevices, recipes (>= 0.0.1),\nwithr (>= 2.0.0)"          
caretEnsemble "methods, pbapply, ggplot2, digest, plyr, lattice, gridExtra,\ndata.table, caret"                                                                   
caTools       "bitops"                                                                                                                                            
class         "MASS"                                                                                                                                              
cluster       "graphics, grDevices, stats, utils"                                                                                                                 
codetools     NA                                                                                                                                                  
colorspace    "graphics, grDevices"                                                                                                                               
curl          NA                                                                                                                                                  
CVST          NA                                                                                                                                                  
data.table    "methods"                                                                                                                                           
ddalpha       "Rcpp (>= 0.11.0)"                                                                                                                                  
DEoptimR      "stats"                                                                                                                                             
dichromat     NA                                                                                                                                                  
digest        NA                                                                                                                                                  
dimRed        NA                                                                                                                                                  
dplyr         "assertthat, bindrcpp (>= 0.2), glue (>= 1.1.1), magrittr,\nmethods, pkgconfig, rlang (>= 0.1.2), R6, Rcpp (>= 0.12.7),\ntibble (>= 1.3.1), utils"  
DRR           "stats, methods"                                                                                                                                    
e1071         "graphics, grDevices, class, stats, methods, utils"                                                                                                 
evaluate      "methods, stringr (>= 0.6.2)"                                                                                                                       
foreach       "codetools, utils, iterators"                                                                                                                       
foreign       "methods, utils, stats"                                                                                                                             
gdata         "gtools, stats, methods, utils"                                                                                                                     
ggplot2       "digest, grid, gtable (>= 0.1.1), MASS, plyr (>= 1.7.1),\nreshape2, scales (>= 0.4.1), stats, tibble, lazyeval"                                     
glue          "methods"                                                                                                                                           
gower         NA                                                                                                                                                  
gplots        "gtools, gdata, stats, caTools, KernSmooth"                                                                                                         
gridExtra     "gtable, grid, grDevices, graphics, utils"                                                                                                          
gtable        "grid"                                                                                                                                              
gtools        NA                                                                                                                                                  
highr         NA                                                                                                                                                  
ipred         "rpart (>= 3.1-8), MASS, survival, nnet, class, prodlim"                                                                                            
iterators     NA                                                                                                                                                  
kernlab       "methods, stats, grDevices, graphics"                                                                                                               
KernSmooth    NA                                                                                                                                                  
knitr         "evaluate (>= 0.10), digest, highr, markdown, stringr (>= 0.6),\nyaml, methods, tools"                                                              
labeling      NA                                                                                                                                                  
lattice       "grid, grDevices, graphics, stats, utils"                                                                                                           
lava          "grDevices, graphics, methods, numDeriv, stats, survival, utils"                                                                                    
lazyeval      NA                                                                                                                                                  
lubridate     "stringr, Rcpp (>= 0.11),"                                                                                                                          
magrittr      NA                                                                                                                                                  
markdown      "utils, mime (>= 0.3)"                                                                                                                              
MASS          "methods"                                                                                                                                           
Matrix        "methods, graphics, grid, stats, utils, lattice"                                                                                                    
mgcv          "methods, stats, graphics, Matrix"                                                                                                                  
mime          "tools"                                                                                                                                             
ModelMetrics  "Rcpp"                                                                                                                                              
munsell       "colorspace, methods"                                                                                                                               
nlme          "graphics, stats, utils, lattice"                                                                                                                   
numDeriv      NA                                                                                                                                                  
pbapply       "parallel"                                                                                                                                          
pkgconfig     "utils"                                                                                                                                             
plogr         NA                                                                                                                                                  
              LinkingTo                                            
anim.plots    NA                                                   
animation     NA                                                   
assertthat    NA                                                   
BH            NA                                                   
bindr         NA                                                   
bindrcpp      "Rcpp, plogr"                                        
bitops        NA                                                   
boot          NA                                                   
Boruta        NA                                                   
caret         NA                                                   
caretEnsemble NA                                                   
caTools       NA                                                   
class         NA                                                   
cluster       NA                                                   
codetools     NA                                                   
colorspace    NA                                                   
curl          NA                                                   
CVST          NA                                                   
data.table    NA                                                   
ddalpha       "BH, Rcpp"                                           
DEoptimR      NA                                                   
dichromat     NA                                                   
digest        NA                                                   
dimRed        NA                                                   
dplyr         "Rcpp (>= 0.12.0), BH (>= 1.58.0-1), bindrcpp, plogr"
DRR           NA                                                   
e1071         NA                                                   
evaluate      NA                                                   
foreach       NA                                                   
foreign       NA                                                   
gdata         NA                                                   
ggplot2       NA                                                   
glue          NA                                                   
gower         NA                                                   
gplots        NA                                                   
gridExtra     NA                                                   
gtable        NA                                                   
gtools        NA                                                   
highr         NA                                                   
ipred         NA                                                   
iterators     NA                                                   
kernlab       NA                                                   
KernSmooth    NA                                                   
knitr         NA                                                   
labeling      NA                                                   
lattice       NA                                                   
lava          NA                                                   
lazyeval      NA                                                   
lubridate     "Rcpp,"                                              
magrittr      NA                                                   
markdown      NA                                                   
MASS          NA                                                   
Matrix        NA                                                   
mgcv          NA                                                   
mime          NA                                                   
ModelMetrics  "Rcpp"                                               
munsell       NA                                                   
nlme          NA                                                   
numDeriv      NA                                                   
pbapply       NA                                                   
pkgconfig     NA                                                   
plogr         NA                                                   
              Suggests                                                                                                                                                                                                                                                     
anim.plots    "maps, knitr, mapdata, testthat"                                                                                                                                                                                                                             
animation     "MASS, class, testit"                                                                                                                                                                                                                                        
assertthat    "testthat"                                                                                                                                                                                                                                                   
BH            NA                                                                                                                                                                                                                                                           
bindr         "testthat"                                                                                                                                                                                                                                                   
bindrcpp      "testthat"                                                                                                                                                                                                                                                   
bitops        NA                                                                                                                                                                                                                                                           
boot          "MASS, survival"                                                                                                                                                                                                                                             
Boruta        "mlbench, rFerns, randomForest"                                                                                                                                                                                                                              
caret         "BradleyTerry2, e1071, earth (>= 2.2-3), fastICA, gam, ipred,\nkernlab, klaR, MASS, ellipse, mda, mgcv, mlbench, MLmetrics,\nnnet, party (>= 0.9-99992), pls, pROC, proxy, randomForest,\nRANN, spls, subselect, pamr, superpc, Cubist, testthat (>=\n0.9.1)"
caretEnsemble "caTools, testthat, lintr, randomForest, glmnet, rpart,\nkernlab, nnet, e1071, ipred, pROC, knitr, mlbench, MASS, gbm,\nklaR"                                                                                                                                
caTools       "MASS, rpart"                                                                                                                                                                                                                                                
class         NA                                                                                                                                                                                                                                                           
cluster       "MASS"                                                                                                                                                                                                                                                       
codetools     NA                                                                                                                                                                                                                                                           
colorspace    "datasets, stats, utils, KernSmooth, MASS, kernlab, mvtnorm,\nvcd, dichromat, tcltk, shiny, shinyjs"                                                                                                                                                         
curl          "testthat (>= 1.0.0), knitr, jsonlite, rmarkdown, magrittr,\nhttpuv, webutils"                                                                                                                                                                               
CVST          NA                                                                                                                                                                                                                                                           
data.table    "bit64, knitr, nanotime, chron, ggplot2 (>= 0.9.0), plyr,\nreshape, reshape2, testthat (>= 0.4), hexbin, fastmatch, nlme,\nxts, gdata, GenomicRanges, caret, curl, zoo, plm, rmarkdown,\nparallel"                                                           
ddalpha       NA                                                                                                                                                                                                                                                           
DEoptimR      NA                                                                                                                                                                                                                                                           
dichromat     NA                                                                                                                                                                                                                                                           
digest        "knitr, rmarkdown"                                                                                                                                                                                                                                           
dimRed        "MASS, Matrix, RANN, RSpectra, Rtsne, coRanking, diffusionMap,\nenergy, fastICA, ggplot2, graphics, igraph, kernlab, lle, loe,\noptimx, pcaPP, rgl, scales, scatterplot3d, stats, testthat,\ntidyr, vegan"                                                   
dplyr         "bit64, covr, dbplyr, dtplyr, DBI, ggplot2, hms, knitr, Lahman\n(>= 3.0-1), mgcv, microbenchmark, nycflights13, rmarkdown,\nRMySQL, RPostgreSQL, RSQLite, testthat, withr"                                                                                   
DRR           "knitr"                                                                                                                                                                                                                                                      
e1071         "cluster, mlbench, nnet, randomForest, rpart, SparseM, xtable,\nMatrix, MASS"                                                                                                                                                                                
evaluate      "testthat, lattice, ggplot2"                                                                                                                                                                                                                                 
foreach       "randomForest"                                                                                                                                                                                                                                               
foreign       NA                                                                                                                                                                                                                                                           
gdata         "RUnit"                                                                                                                                                                                                                                                      
ggplot2       "covr, ggplot2movies, hexbin, Hmisc, lattice, mapproj, maps,\nmaptools, mgcv, multcomp, nlme, testthat (>= 0.11.0), quantreg,\nknitr, rpart, rmarkdown, svglite"                                                                                             
glue          "testthat, covr, magrittr, crayon, knitr, rmarkdown, DBI,\nRSQLite, R.utils, forcats, microbenchmark, rprintf, stringr,\nggplot2"                                                                                                                            
gower         "testthat, knitr, rmarkdown"                                                                                                                                                                                                                                 
gplots        "grid, MASS"                                                                                                                                                                                                                                                 
gridExtra     "ggplot2, egg, lattice, knitr, testthat"                                                                                                                                                                                                                     
gtable        "testthat, covr"                                                                                                                                                                                                                                             
gtools        NA                                                                                                                                                                                                                                                           
highr         "knitr, testit"                                                                                                                                                                                                                                              
ipred         "mvtnorm, mlbench, TH.data"                                                                                                                                                                                                                                  
iterators     "RUnit"                                                                                                                                                                                                                                                      
kernlab       NA                                                                                                                                                                                                                                                           
KernSmooth    "MASS"                                                                                                                                                                                                                                                       
knitr         "formatR, testit, rgl (>= 0.95.1201), codetools, rmarkdown,\nhtmlwidgets (>= 0.7), webshot, tikzDevice (>= 0.10), png, jpeg,\nXML, RCurl, DBI (>= 0.4-1), tibble"                                                                                            
labeling      NA                                                                                                                                                                                                                                                           
lattice       "KernSmooth, MASS, latticeExtra"                                                                                                                                                                                                                             
lava          "KernSmooth, Matrix, Rgraphviz, ascii, data.table, fields,\nforeach, geepack, gof (>= 0.9), graph, igraph (>= 0.6),\nlava.tobit, lme4, mets (>= 1.1), optimx, quantreg, rgl,\ntestthat (>= 0.11), visNetwork, zoo"                                           
lazyeval      "knitr, rmarkdown (>= 0.2.65), testthat, covr"                                                                                                                                                                                                               
lubridate     "testthat, knitr, covr"                                                                                                                                                                                                                                      
magrittr      "testthat, knitr"                                                                                                                                                                                                                                            
markdown      "knitr, RCurl"                                                                                                                                                                                                                                               
MASS          "lattice, nlme, nnet, survival"                                                                                                                                                                                                                              
Matrix        "expm, MASS"                                                                                                                                                                                                                                                 
mgcv          "splines, parallel, survival, MASS"                                                                                                                                                                                                                          
mime          NA                                                                                                                                                                                                                                                           
ModelMetrics  "testthat"                                                                                                                                                                                                                                                   
munsell       "ggplot2, testthat"                                                                                                                                                                                                                                          
nlme          "Hmisc, MASS"                                                                                                                                                                                                                                                
numDeriv      NA                                                                                                                                                                                                                                                           
pbapply       NA                                                                                                                                                                                                                                                           
pkgconfig     "covr, testthat, disposables (>= 1.0.3)"                                                                                                                                                                                                                     
plogr         "Rcpp"                                                                                                                                                                                                                                                       
              Enhances                                                  
anim.plots    NA                                                        
animation     NA                                                        
assertthat    NA                                                        
BH            NA                                                        
bindr         NA                                                        
bindrcpp      NA                                                        
bitops        NA                                                        
boot          NA                                                        
Boruta        NA                                                        
caret         NA                                                        
caretEnsemble NA                                                        
caTools       NA                                                        
class         NA                                                        
cluster       NA                                                        
codetools     NA                                                        
colorspace    NA                                                        
curl          NA                                                        
CVST          NA                                                        
data.table    NA                                                        
ddalpha       NA                                                        
DEoptimR      "robustbase"                                              
dichromat     NA                                                        
digest        NA                                                        
dimRed        NA                                                        
dplyr         NA                                                        
DRR           NA                                                        
e1071         NA                                                        
evaluate      NA                                                        
foreach       "compiler, doMC, RUnit, doParallel"                       
foreign       NA                                                        
gdata         NA                                                        
ggplot2       "sp"                                                      
glue          NA                                                        
gower         NA                                                        
gplots        NA                                                        
gridExtra     NA                                                        
gtable        NA                                                        
gtools        NA                                                        
highr         NA                                                        
ipred         NA                                                        
iterators     NA                                                        
kernlab       NA                                                        
KernSmooth    NA                                                        
knitr         NA                                                        
labeling      NA                                                        
lattice       "chron"                                                   
lava          NA                                                        
lazyeval      NA                                                        
lubridate     "chron, fts, timeSeries, timeDate, tis, tseries, xts, zoo"
magrittr      NA                                                        
markdown      NA                                                        
MASS          NA                                                        
Matrix        "MatrixModels, graph, SparseM, sfsmisc"                   
mgcv          NA                                                        
mime          NA                                                        
ModelMetrics  NA                                                        
munsell       NA                                                        
nlme          NA                                                        
numDeriv      NA                                                        
pbapply       NA                                                        
pkgconfig     NA                                                        
plogr         NA                                                        
              License                         
anim.plots    "GPL-2"                         
animation     "GPL"                           
assertthat    "GPL-3"                         
BH            "BSL-1.0"                       
bindr         "MIT + file LICENSE"            
bindrcpp      "MIT + file LICENSE"            
bitops        "GPL (>= 2)"                    
boot          "Unlimited"                     
Boruta        "GPL (>= 2)"                    
caret         "GPL (>= 2)"                    
caretEnsemble "MIT + file LICENSE"            
caTools       "GPL-3"                         
class         "GPL-2 | GPL-3"                 
cluster       "GPL (>= 2)"                    
codetools     "GPL"                           
colorspace    "BSD_3_clause + file LICENSE"   
curl          "MIT + file LICENSE"            
CVST          "GPL (>= 2.0)"                  
data.table    "GPL-3 | file LICENSE"          
ddalpha       "GPL-2"                         
DEoptimR      "GPL (>= 2)"                    
dichromat     "GPL-2"                         
digest        "GPL (>= 2)"                    
dimRed        "GPL-3 | file LICENSE"          
dplyr         "MIT + file LICENSE"            
DRR           "GPL-3"                         
e1071         "GPL-2"                         
evaluate      "MIT + file LICENSE"            
foreach       "Apache License (== 2.0)"       
foreign       "GPL (>= 2)"                    
gdata         "GPL-2"                         
ggplot2       "GPL-2 | file LICENSE"          
glue          "MIT + file LICENSE"            
gower         "GPL-3"                         
gplots        "GPL-2"                         
gridExtra     "GPL (>= 2)"                    
gtable        "GPL-2"                         
gtools        "GPL-2"                         
highr         "GPL"                           
ipred         "GPL (>= 2)"                    
iterators     "Apache License (== 2.0)"       
kernlab       "GPL-2"                         
KernSmooth    "Unlimited"                     
knitr         "GPL"                           
labeling      "MIT + file LICENSE | Unlimited"
lattice       "GPL (>= 2)"                    
lava          "GPL-3"                         
lazyeval      "GPL-3"                         
lubridate     "GPL-2"                         
magrittr      "MIT + file LICENSE"            
markdown      "GPL-2"                         
MASS          "GPL-2 | GPL-3"                 
Matrix        "GPL (>= 2) | file LICENCE"     
mgcv          "GPL (>= 2)"                    
mime          "GPL"                           
ModelMetrics  "GPL (>= 2)"                    
munsell       "MIT + file LICENSE"            
nlme          "GPL (>= 2) | file LICENCE"     
numDeriv      "GPL-2"                         
pbapply       "GPL-2"                         
pkgconfig     "MIT + file LICENSE"            
plogr         "MIT + file LICENSE"            
              License_is_FOSS
anim.plots    NA             
animation     NA             
assertthat    NA             
BH            NA             
bindr         NA             
bindrcpp      NA             
bitops        NA             
boot          NA             
Boruta        NA             
caret         NA             
caretEnsemble NA             
caTools       NA             
class         NA             
cluster       NA             
codetools     NA             
colorspace    NA             
curl          NA             
CVST          NA             
data.table    NA             
ddalpha       NA             
DEoptimR      NA             
dichromat     NA             
digest        NA             
dimRed        NA             
dplyr         NA             
DRR           NA             
e1071         NA             
evaluate      NA             
foreach       NA             
foreign       NA             
gdata         NA             
ggplot2       NA             
glue          NA             
gower         NA             
gplots        NA             
gridExtra     NA             
gtable        NA             
gtools        NA             
highr         NA             
ipred         NA             
iterators     NA             
kernlab       NA             
KernSmooth    NA             
knitr         NA             
labeling      NA             
lattice       NA             
lava          NA             
lazyeval      NA             
lubridate     NA             
magrittr      NA             
markdown      NA             
MASS          NA             
Matrix        NA             
mgcv          NA             
mime          NA             
ModelMetrics  NA             
munsell       NA             
nlme          NA             
numDeriv      NA             
pbapply       NA             
pkgconfig     NA             
plogr         NA             
              License_restricts_use OS_type
anim.plots    NA                    NA     
animation     NA                    NA     
assertthat    NA                    NA     
BH            NA                    NA     
bindr         NA                    NA     
bindrcpp      NA                    NA     
bitops        NA                    NA     
boot          NA                    NA     
Boruta        NA                    NA     
caret         NA                    NA     
caretEnsemble NA                    NA     
caTools       NA                    NA     
class         NA                    NA     
cluster       NA                    NA     
codetools     NA                    NA     
colorspace    NA                    NA     
curl          NA                    NA     
CVST          NA                    NA     
data.table    NA                    NA     
ddalpha       NA                    NA     
DEoptimR      NA                    NA     
dichromat     NA                    NA     
digest        NA                    NA     
dimRed        NA                    NA     
dplyr         NA                    NA     
DRR           NA                    NA     
e1071         NA                    NA     
evaluate      NA                    NA     
foreach       NA                    NA     
foreign       NA                    NA     
gdata         NA                    NA     
ggplot2       NA                    NA     
glue          NA                    NA     
gower         NA                    NA     
gplots        NA                    NA     
gridExtra     NA                    NA     
gtable        NA                    NA     
gtools        NA                    NA     
highr         NA                    NA     
ipred         NA                    NA     
iterators     NA                    NA     
kernlab       NA                    NA     
KernSmooth    NA                    NA     
knitr         NA                    NA     
labeling      NA                    NA     
lattice       NA                    NA     
lava          NA                    NA     
lazyeval      NA                    NA     
lubridate     NA                    NA     
magrittr      NA                    NA     
markdown      NA                    NA     
MASS          NA                    NA     
Matrix        NA                    NA     
mgcv          NA                    NA     
mime          NA                    NA     
ModelMetrics  NA                    NA     
munsell       NA                    NA     
nlme          NA                    NA     
numDeriv      NA                    NA     
pbapply       NA                    NA     
pkgconfig     NA                    NA     
plogr         NA                    NA     
              MD5sum NeedsCompilation Built  
anim.plots    NA     "no"             "3.4.1"
animation     NA     "no"             "3.4.1"
assertthat    NA     "no"             "3.4.1"
BH            NA     "no"             "3.4.1"
bindr         NA     "no"             "3.4.1"
bindrcpp      NA     "yes"            "3.4.1"
bitops        NA     "yes"            "3.4.1"
boot          NA     "no"             "3.4.1"
Boruta        NA     "no"             "3.4.1"
caret         NA     "yes"            "3.4.1"
caretEnsemble NA     "no"             "3.4.1"
caTools       NA     "yes"            "3.4.1"
class         NA     "yes"            "3.4.1"
cluster       NA     "yes"            "3.4.1"
codetools     NA     "no"             "3.4.1"
colorspace    NA     "yes"            "3.4.1"
curl          NA     "yes"            "3.4.1"
CVST          NA     "no"             "3.4.1"
data.table    NA     "yes"            "3.4.1"
ddalpha       NA     "yes"            "3.4.1"
DEoptimR      NA     "no"             "3.4.1"
dichromat     NA     NA               "3.4.1"
digest        NA     "yes"            "3.4.1"
dimRed        NA     "yes"            "3.4.1"
dplyr         NA     "yes"            "3.4.1"
DRR           NA     "no"             "3.4.1"
e1071         NA     "yes"            "3.4.1"
evaluate      NA     "no"             "3.4.1"
foreach       NA     "no"             "3.4.1"
foreign       NA     "yes"            "3.4.1"
gdata         NA     "no"             "3.4.1"
ggplot2       NA     "no"             "3.4.1"
glue          NA     "yes"            "3.4.1"
gower         NA     "yes"            "3.4.1"
gplots        NA     "no"             "3.4.1"
gridExtra     NA     "no"             "3.4.1"
gtable        NA     "no"             "3.4.1"
gtools        NA     "yes"            "3.4.1"
highr         NA     "no"             "3.4.1"
ipred         NA     "yes"            "3.4.1"
iterators     NA     "no"             "3.4.1"
kernlab       NA     "yes"            "3.4.1"
KernSmooth    NA     "yes"            "3.4.1"
knitr         NA     "no"             "3.4.1"
labeling      NA     "no"             "3.4.1"
lattice       NA     "yes"            "3.4.1"
lava          NA     "no"             "3.4.1"
lazyeval      NA     "yes"            "3.4.1"
lubridate     NA     "yes"            "3.4.1"
magrittr      NA     "no"             "3.4.1"
markdown      NA     "yes"            "3.4.1"
MASS          NA     "yes"            "3.4.1"
Matrix        NA     "yes"            "3.4.1"
mgcv          NA     "yes"            "3.4.1"
mime          NA     "yes"            "3.4.1"
ModelMetrics  NA     "yes"            "3.4.1"
munsell       NA     "no"             "3.4.1"
nlme          NA     "yes"            "3.4.1"
numDeriv      NA     "no"             "3.4.1"
pbapply       NA     "no"             "3.4.1"
pkgconfig     NA     "no"             "3.4.1"
plogr         NA     "no"             "3.4.1"
 [ reached getOption("max.print") -- omitted 61 rows ]

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